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Data Analysis and Visualization

Data Sets

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_{Source: own work}

Data set websites

• Kaggle
• Zenodo

Data sets

Genetics

• SARS-CoV-2 Genetics
• Covid-19 Original RNA Sequence (Wu et al., 2020)
• Of Genomes And Genetics - HackerEarth ML
• Predict the genetic disorders dataset-of genomes
• Arabidopsis thaliana Short Reads
• My Complete Genome
• Human Genes
• Genetic Variant Classifications

Gene Expression

• Mice Protein Expression
• Breast Cancer Gene Expression Profiles (METABRIC)
• Gene expression dataset (Golub et al.)
• RNA-Seq reveals an unprecedented complexity
• Human liver RNA-Seq gene expression (903 samples)

Genotyping and Phenotyping

• Rice Genotype and Phenotype Data
• ALS Samples with Genotyping Data
• SNP dataset for GWAS
• Medulloblastoma omics data

Pharmacology and Molecular Interventions

• Cancer Inhibitors
• Comprehensive Drug Information Dataset
• Properties of ATC accepted medicines
• Beta-Lactamase
• Dihydrofolate Reductase Inhibitors Data - dhfr
• Cytokine inhibition, production and autoimmunity

Health, disease risk and population studies

• Heart Disease Health Indicators Dataset
• Cervical Cancer Risk Classification
• Predict lifespan of a comet goldfish
• Predicting Heart Disease Using Clinical Variables
• Multiple Sclerosis Disease
• Age Assessment & Disease Risk Prediction
• Lung Cancer

Imaging

• Brain MRI Scan Images - Tumor Detection
• Skin Cancer MNIST: HAM10000
• Breast Cancer Wisconsin (Diagnostic) Data Set
• Melanoma Cancer Image Dataset
• Apple Tree Leaf Disease Dataset

Metagenomics, Microbiomes and Classification

• Microbes Dataset
• Human gut microbiome of the children with ASD
• Mushroom classification

Food Health, Allergens, allergies and hygiene:

• food-allergens-and-allergies
• uk-food-hygiene-rating-data-london
• fried-food-consumption-and-mortality
• covid19-healthy-diet-dataset
• eating-health-module-dataset
• foodborne-diseases

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